Month: January 2025

Pymol

There are molecules that we can not see with our naked eyes. Protein is one of them.

You may see some proteins using PyMOL on your computer.

You could install free PyMOL in your terminal using brew:

Brew install pymol

Now, to see any protein there, use fetch command:

fetch 9DYH

You could get PDBIDs and more information from here: RCSB.

This is another useful command to arrange all PDBs in order: alignto 

alignto PDBID (eg 9DW7), object=all_to_PDBID (eg 9DW7)

You could start learning about protein structure by digging more websites. 🤞

New year by Mr. Cha | 새 해, 차강석 씀

Jan 10, 2025 by Cha, Kang Seok (차강석)

   January 1st, 00:00!
   although the new year has arrived,
   dawn light is still far away

   In the dark,
   I wander around looking for the light
   I can't even see the faint light

   However, 5 to 6 hours 
   If I wait, the new year will come dazzlingly every day.
    1월 1일 0시
   새해가 밝았다지만
   여명(黎明)은 아직 멀었다

   어둠 속에서
   빛을 찾아 헤매지만
   아스라한 빛도 볼 수 없다

Color

March 06 2020 by Sooyoung Kim

At the place where colors are strong, 
there is one which color is light and shallow.

At the place where there are strong opinions,
there is one which has no opinions

Strangely 

My heart dwells with light colors at the place where colors are strong,
and dwells with no claims at the place wehre there are strong opinions.
색
3/6/2020

색이 진한곳에
색이 흐린 사람 하나가 있다
 
자기 주장 많은 곳에
자기 주장 없는 이가 있다
 
이상하게도
 
색이 진한 그곳에 흐림이
주장 많은곳에 없음이
내 마음 머문다

What killed it? by Mr. Cha | 무엇이 죽였을까? 차강석 씀|

Dec 23, 2024 by Cha, Kang Seok (차강석)

What killed it? 

What did make me explode:
Flame like red blood from snow like beard ?

Buddha? Jesus? 
Muhammad? Marx? 
What took dreams away from peoples? 

it's science or cutting-edge tech armored humans!

———————————————————

🙏🏻I/Sooyoung share Cha's this poem but in me, science is dreams and hopes.
   무엇이 죽였을까?

   뭐가 눈 같은 수염에 
   불꽃처럼 붉은 피를 
   용솟음치게 만들었을까?

   부처? 예수?
   마호멧? 마르크스?
   사람들에게서 꿈을 빼앗아 간나?

   그것은 바로 과학
   즉, 첨단을 나는 인간들!

Pray before the choices

Feb 24, 2020, by Sooyoung Kim

As I get older,
I hesitate more
when I face with choices

I pray that:
my choices lead to the right path
and the best

for me and my family
I pray every moment that :
I make the right choices at every moment
선택과 기도
김수영 씀 2020년 2월 24일

나이들면서
더욱 주저한다
선택 앞에서
 
기도한다
나의 선택이
올바른 길이길
최선이길
 
나와 가족을 위해
매 순간 올바른 선택을 하게 해 달라고
매 순간 기도한다
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